Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC005089.1-201ENST00000619486 2241 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AL158070.2-201ENST00000623713 1621 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AC097359.2-201ENST00000604992 2389 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AL353779.1-201ENST00000434793 351 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 VDAC1P7-201ENST00000462417 847 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AC107373.2-201ENST00000607735 490 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 MIR8072-201ENST00000614241 80 ntBASIC12.26□□□□□ -0.45
SRRM4A7MD48 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.26□□□□□ -0.45
SRRM4A7MD48 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SRRM4A7MD48 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AL137783.1-201ENST00000623494 1896 ntBASIC12.25□□□□□ -0.45
SRRM4A7MD48 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 PMS2P2-201ENST00000425039 1128 ntBASIC12.25□□□□□ -0.45
SRRM4A7MD48 HLA-K-203ENST00000430151 1046 ntBASIC12.25□□□□□ -0.45
SRRM4A7MD48 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SRRM4A7MD48 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.25□□□□□ -0.45
SRRM4A7MD48 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms