Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 AC018638.5-201ENST00000450885 754 ntBASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 AL451000.1-201ENST00000451300 1186 ntBASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 WASH7P-201ENST00000488147 1351 ntBASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 RNA5SP406-201ENST00000516106 112 ntBASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88BA6NKF7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AC073869.2-201ENST00000417338 1026 ntBASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms