Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 AL021578.1-201ENST00000613646 709 ntBASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 AC012508.2-201ENST00000567613 1472 ntBASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3BA6NDS4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 NKAIN1P1-201ENST00000435754 582 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SERPINA13P-202ENST00000478994 924 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC005730.2-201ENST00000564549 1184 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 NDUFV2P1-201ENST00000596415 907 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC138649.2-201ENST00000615886 705 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3BA6NDS4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 REXO1L4P-201ENST00000605109 1937 ntBASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AL354877.1-201ENST00000424412 413 ntBASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AC044849.1-201ENST00000519737 1188 ntBASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 AC087481.3-201ENST00000602886 1894 ntBASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3BA6NDS4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms