Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AC106730.1-201ENST00000566722 1090 ntBASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AC140113.2-201ENST00000604370 208 ntBASIC16.29■□□□□ 0.2
CTAGE9A4FU28 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 RN7SL589P-201ENST00000481268 310 ntBASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 FAM86C2P-203ENST00000528684 1004 ntBASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTAGE9A4FU28 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 AP3S2-216ENST00000617003 1561 ntBASIC16.27■□□□□ 0.2
CTAGE9A4FU28 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 HIST3H2BA-201ENST00000436555 524 ntBASIC16.27■□□□□ 0.2
CTAGE9A4FU28 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.27■□□□□ 0.2
CTAGE9A4FU28 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms