Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.59■□□□□ 0.25
CCDC66A2RUB6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 KRT8P48-201ENST00000515599 1220 ntBASIC16.59■□□□□ 0.25
CCDC66A2RUB6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AL671883.3-201ENST00000603274 991 ntBASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AC084121.4-201ENST00000641598 221 ntBASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AF228730.8-201ENST00000642140 221 ntBASIC16.59■□□□□ 0.25
CCDC66A2RUB6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC66A2RUB6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CCDC66A2RUB6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AC023274.1-201ENST00000418278 595 ntBASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.58■□□□□ 0.24
CCDC66A2RUB6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AC097359.3-201ENST00000603982 1210 ntBASIC16.58■□□□□ 0.24
CCDC66A2RUB6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC66A2RUB6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC66A2RUB6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms