Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM129A0AVI4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM129A0AVI4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM129A0AVI4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM129A0AVI4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 LINC02560-201ENST00000596379 459 ntBASIC13.79□□□□□ -0.2
TMEM129A0AVI4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 AL365209.1-201ENST00000624418 6473 ntBASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM129A0AVI4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 AC015656.1-201ENST00000624209 3578 ntBASIC13.78□□□□□ -0.2
TMEM129A0AVI4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 FAM207CP-201ENST00000443486 507 ntBASIC13.78□□□□□ -0.2
TMEM129A0AVI4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 AL512361.1-201ENST00000554200 418 ntBASIC13.78□□□□□ -0.2
TMEM129A0AVI4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM129A0AVI4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms