Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 MIR600HG-201ENST00000449175 5984 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 HLA-V-204ENST00000476601 1289 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC112482.1-201ENST00000492080 688 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC138969.3-201ENST00000546612 1459 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC138932.2-201ENST00000548268 1459 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC126755.4-201ENST00000549796 1459 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01115-203ENST00000606068 577 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC074044.1-201ENST00000609673 707 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 COL6A4P2-202ENST00000504443 2753 ntBASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 RPSAP43-201ENST00000402237 625 ntBASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC023090.2-201ENST00000625182 2110 ntBASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL591122.2-201ENST00000624125 1853 ntBASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV6-7A0A0A0MS04 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms