Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA1Q9Y5H4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 GHSR-202ENST00000427970 912 ntBASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 AC104073.2-201ENST00000453737 312 ntBASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 DUX4L47-201ENST00000566374 394 ntBASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 AC018635.2-201ENST00000608625 364 ntBASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA1Q9Y5H4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 AC100827.2-201ENST00000563214 1194 ntBASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 AC090164.2-201ENST00000611487 516 ntBASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 AF254983.2-201ENST00000612331 135 ntBASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA1Q9Y5H4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms