Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AC015910.1-201ENST00000579400 975 ntBASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 AC006538.3-201ENST00000612495 578 ntBASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.39□□□□□ -0.27
RHBDD3Q9Y3P4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AC241585.1-201ENST00000433527 519 ntBASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RHBDD3Q9Y3P4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms