Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RPL5P21-201ENST00000404620 815 ntBASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 AL512384.1-201ENST00000406683 331 ntBASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 AC112492.5-201ENST00000421897 457 ntBASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 AC107373.2-201ENST00000607735 490 ntBASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC013268.4-201ENST00000637413 2228 ntBASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC022210.1-201ENST00000449856 793 ntBASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 KRT17P8-201ENST00000540749 863 ntBASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC124283.3-201ENST00000570869 594 ntBASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 CICP11-201ENST00000434745 2827 ntBASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPH3AQ9Y2J0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.02□□□□□ -0.16
RPH3AQ9Y2J0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AL162726.2-201ENST00000438986 1017 ntBASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AP001582.1-201ENST00000525856 295 ntBASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 MIR4525-201ENST00000580000 75 ntBASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPH3AQ9Y2J0 AC010319.3-201ENST00000597028 470 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms