Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AC141586.1-203ENST00000567242 366 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AC103691.2-201ENST00000618824 433 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 AL162727.3-201ENST00000635661 2787 ntBASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 AC027237.1-201ENST00000560942 655 ntBASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 AC007881.3-201ENST00000608897 607 ntBASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 AP001065.2-201ENST00000617205 644 ntBASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SHANK2Q9UPX8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SHANK2Q9UPX8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
SHANK2Q9UPX8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SHANK2Q9UPX8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 ST13P19-201ENST00000442505 1124 ntBASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHANK2Q9UPX8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHANK2Q9UPX8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC005632.3-201ENST00000605544 308 ntBASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC242376.2-201ENST00000619355 883 ntBASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC009084.3-201ENST00000623356 437 ntBASIC22■■□□□ 1.11
SHANK2Q9UPX8 AL805961.1-201ENST00000642026 753 ntBASIC22■■□□□ 1.11
SHANK2Q9UPX8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHANK2Q9UPX8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC22■■□□□ 1.11
SHANK2Q9UPX8 AC138035.3-201ENST00000622706 2791 ntBASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHANK2Q9UPX8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms