Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 VDAC1P7-201ENST00000462417 847 ntBASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 AL049840.4-201ENST00000602422 811 ntBASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 AL354702.1-201ENST00000442006 1960 ntBASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHA7Q9UN72 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 AC036164.1-201ENST00000570544 333 ntBASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 AC139530.3-201ENST00000620344 690 ntBASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHA7Q9UN72 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AC041040.2-201ENST00000622926 2899 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AL645937.2-201ENST00000396808 931 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 AC093512.1-201ENST00000617969 520 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.24■□□□□ 0.35
PCDHA7Q9UN72 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms