Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNOT11Q9UKZ1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AP001267.2-201ENST00000532619 2086 ntBASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AC002472.2-201ENST00000442739 958 ntBASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 FAM207CP-201ENST00000443486 507 ntBASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 RN7SL204P-201ENST00000582831 262 ntBASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT11Q9UKZ1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 INTS4P1-203ENST00000641008 3683 ntBASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC236430.1-201ENST00000402231 743 ntBASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC044860.1-202ENST00000559481 777 ntBASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 AC004840.1-201ENST00000636359 365 ntBASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 MST1P2-201ENST00000457982 2291 ntBASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CNOT11Q9UKZ1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms