Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLCF1Q9UBD9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLCF1Q9UBD9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLCF1Q9UBD9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SBF1P1-201ENST00000444527 5631 ntBASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 FAM8A4P-201ENST00000435433 1213 ntBASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 C18orf15-201ENST00000623680 2534 ntBASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCF1Q9UBD9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC126365.1-201ENST00000578585 1514 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 Z93015.1-201ENST00000451718 390 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC108725.1-201ENST00000495472 409 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC026434.2-201ENST00000506094 1078 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 MIR4741-201ENST00000579822 90 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 EEF1DP1-201ENST00000585891 896 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 AC004466.1-201ENST00000599515 1080 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 MIR6869-201ENST00000619434 62 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms