Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXXC1Q9P0U4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CXXC1Q9P0U4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 OR6D1P-203ENST00000641209 4860 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 ALG1L6P-201ENST00000515248 758 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 ALG1L13P-202ENST00000519320 584 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 AP003398.1-201ENST00000531124 318 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 RN7SL596P-201ENST00000582123 288 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 AP003392.6-201ENST00000607709 325 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 LINC02199-201ENST00000506655 2702 ntBASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.06■□□□□ 0.16
CXXC1Q9P0U4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CROCCP1-201ENST00000426910 5675 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 HIST2H2BA-201ENST00000412169 381 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AL807761.2-201ENST00000422849 729 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CICP12-201ENST00000455801 843 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC093752.3-201ENST00000567343 901 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC087392.5-201ENST00000612517 489 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC092299.1-201ENST00000632679 757 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms