Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MIR3907-201ENST00000579424 151 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 RN7SL574P-201ENST00000581512 297 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AC132192.2-201ENST00000596206 1147 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AL132994.2-201ENST00000603120 687 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 ACTG1P2-201ENST00000415776 1125 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 ACTG1P11-201ENST00000425411 1125 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 HLA-J-204ENST00000495278 958 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 NUP210P1-202ENST00000504322 710 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 ALG3P1-201ENST00000508806 1114 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 AL353726.2-201ENST00000623259 884 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 AC079336.7-201ENST00000623428 1078 ntBASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC10Q9NYD6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 FGFR3P5-201ENST00000564496 886 ntBASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC009884.2-201ENST00000603110 324 ntBASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 BX088702.1-201ENST00000610784 235 ntBASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AC003102.2-201ENST00000589195 1469 ntBASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms