Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 MIR940-201ENST00000401276 94 ntBASIC15□□□□□ -0.01
MKS1Q9NXB0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15□□□□□ -0.01
MKS1Q9NXB0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15□□□□□ -0.01
MKS1Q9NXB0 AL353779.1-201ENST00000434793 351 ntBASIC15□□□□□ -0.01
MKS1Q9NXB0 ZNF890P-202ENST00000530367 1156 ntBASIC15□□□□□ -0.01
MKS1Q9NXB0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MKS1Q9NXB0 MYO15B-237ENST00000642007 4893 ntBASIC15□□□□□ -0.01
MKS1Q9NXB0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15□□□□□ -0.01
MKS1Q9NXB0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15□□□□□ -0.01
MKS1Q9NXB0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 DNAJB3-201ENST00000446806 729 ntBASIC14.99□□□□□ -0.01
MKS1Q9NXB0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 SPDYE12P-201ENST00000618416 771 ntBASIC14.99□□□□□ -0.01
MKS1Q9NXB0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MKS1Q9NXB0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 AC020910.6-201ENST00000623084 1459 ntBASIC14.98□□□□□ -0.01
MKS1Q9NXB0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 MIR574-201ENST00000385209 96 ntBASIC14.98□□□□□ -0.01
MKS1Q9NXB0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
MKS1Q9NXB0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms