Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AL596325.1-201ENST00000563991 1082 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AC009486.1-201ENST00000569860 813 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 WFDC1-204ENST00000613603 549 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 CU634019.7-201ENST00000624153 1185 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 FP236241.2-201ENST00000624906 1185 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 AC105233.6-201ENST00000642093 218 ntBASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PARPBPQ9NWS1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ACKR1-201ENST00000368121 1240 ntBASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 CR383656.12-201ENST00000549567 513 ntBASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AC124283.3-201ENST00000570869 594 ntBASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 BX539320.1-201ENST00000623759 877 ntBASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
PARPBPQ9NWS1 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms