Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 SERBP1P3-201ENST00000459980 809 ntBASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ALG1L5P-201ENST00000482043 771 ntBASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC007967.4-201ENST00000614700 386 ntBASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC018442.1-201ENST00000421439 2061 ntBASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
COMMD4Q9H0A8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AL671883.3-201ENST00000603274 991 ntBASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AC025181.2-201ENST00000606994 802 ntBASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ELL2P1-201ENST00000413990 1906 ntBASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD4Q9H0A8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AC138969.3-201ENST00000546612 1459 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AC138932.2-201ENST00000548268 1459 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AC126755.4-201ENST00000549796 1459 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms