Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AHCYP2-201ENST00000430630 1300 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC007969.1-201ENST00000433675 447 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 EEF1DP1-201ENST00000585891 896 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC132938.4-201ENST00000623835 848 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC006453.4-201ENST00000636949 1252 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC068587.10-201ENST00000641210 219 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC007787.1-201ENST00000588095 1583 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 ACE3P-201ENST00000423435 1973 ntBASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 RNA5SP486-201ENST00000515961 83 ntBASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 CROCCP1-201ENST00000426910 5675 ntBASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 AL390755.1-201ENST00000623716 2027 ntBASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPAP1Q9BWH6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms