Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AC116165.1-201ENST00000611806 668 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 IGHV3-72-202ENST00000621503 303 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 CES1P1-201ENST00000421606 1704 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 AL136982.4-201ENST00000437689 1740 ntBASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF4Q9BUZ4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC067930.6-201ENST00000623257 4947 ntBASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AL512384.1-201ENST00000406683 331 ntBASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 GPR53P-205ENST00000457298 1084 ntBASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC025048.3-201ENST00000590609 569 ntBASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 AC005702.4-201ENST00000618393 416 ntBASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF4Q9BUZ4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms