Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AL596275.1-201ENST00000423464 877 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 KRT18P27-201ENST00000427733 1299 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 KRT8P37-201ENST00000451609 1420 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 FGFR3P6-201ENST00000457012 610 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC109635.5-201ENST00000533593 962 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC061975.2-201ENST00000581722 295 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AL009183.1-201ENST00000603760 355 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AL607033.1-201ENST00000623900 1599 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AL121956.5-201ENST00000625261 221 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC015818.8-201ENST00000587907 1519 ntBASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 RPS8P6-201ENST00000426177 609 ntBASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 TMEM198B-204ENST00000484016 896 ntBASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 CXCL1P1-201ENST00000502804 216 ntBASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 AC020658.7-201ENST00000624274 2442 ntBASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC22CQ9BRL7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms