Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.55□□□□□ -0.24
VRK1Q99986 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VRK1Q99986 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VRK1Q99986 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VRK1Q99986 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 AC087386.2-201ENST00000623212 4637 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 AC134407.2-201ENST00000625089 1978 ntBASIC13.54□□□□□ -0.24
VRK1Q99986 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
VRK1Q99986 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.54□□□□□ -0.24
VRK1Q99986 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
VRK1Q99986 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.54□□□□□ -0.24
VRK1Q99986 MEIS3P1-201ENST00000495167 958 ntBASIC13.54□□□□□ -0.24
VRK1Q99986 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 AC123567.1-201ENST00000548294 1261 ntBASIC13.54□□□□□ -0.24
VRK1Q99986 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 AC005912.2-201ENST00000619492 2400 ntBASIC13.54□□□□□ -0.24
VRK1Q99986 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
VRK1Q99986 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VRK1Q99986 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK1Q99986 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK1Q99986 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VRK1Q99986 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VRK1Q99986 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 AL390755.1-201ENST00000623716 2027 ntBASIC13.53□□□□□ -0.24
VRK1Q99986 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms