Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS2Q99743 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.97□□□□□ -0.01
NPAS2Q99743 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 AC008738.7-201ENST00000609744 511 ntBASIC14.97□□□□□ -0.01
NPAS2Q99743 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NPAS2Q99743 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NPAS2Q99743 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS2Q99743 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS2Q99743 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPAS2Q99743 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS2Q99743 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NPAS2Q99743 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.96□□□□□ -0.01
NPAS2Q99743 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPAS2Q99743 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPAS2Q99743 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPAS2Q99743 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPAS2Q99743 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS2Q99743 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.96□□□□□ -0.01
NPAS2Q99743 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 EEF1DP4-201ENST00000446006 880 ntBASIC14.96□□□□□ -0.01
NPAS2Q99743 TERF1P3-201ENST00000505638 1227 ntBASIC14.96□□□□□ -0.01
NPAS2Q99743 AC084364.1-201ENST00000551967 1556 ntBASIC14.96□□□□□ -0.01
NPAS2Q99743 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPAS2Q99743 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS2Q99743 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.96□□□□□ -0.01
NPAS2Q99743 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
NPAS2Q99743 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS2Q99743 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS2Q99743 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
NPAS2Q99743 AC018529.2-202ENST00000611482 3087 ntBASIC14.96□□□□□ -0.02
NPAS2Q99743 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.95□□□□□ -0.02
NPAS2Q99743 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPAS2Q99743 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 AP000845.1-201ENST00000581677 2131 ntBASIC14.95□□□□□ -0.02
NPAS2Q99743 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPAS2Q99743 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NPAS2Q99743 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPAS2Q99743 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.95□□□□□ -0.02
NPAS2Q99743 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS2Q99743 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.95□□□□□ -0.02
NPAS2Q99743 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms