Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.82□□□□□ -0.04
PKP4Q99569 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.82□□□□□ -0.04
PKP4Q99569 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.82□□□□□ -0.04
PKP4Q99569 KLF2P2-201ENST00000416807 1039 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 AC114812.1-204ENST00000449669 728 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 RN7SL752P-201ENST00000463779 287 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.82□□□□□ -0.04
PKP4Q99569 AL596325.1-201ENST00000563991 1082 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 AP005019.2-201ENST00000615104 511 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 RPSAP52-203ENST00000622976 1023 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.82□□□□□ -0.04
PKP4Q99569 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 AL137783.1-201ENST00000623494 1896 ntBASIC14.82□□□□□ -0.04
PKP4Q99569 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.82□□□□□ -0.04
PKP4Q99569 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PKP4Q99569 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PKP4Q99569 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 AL136379.1-201ENST00000623471 2642 ntBASIC14.81□□□□□ -0.04
PKP4Q99569 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PKP4Q99569 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
PKP4Q99569 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 ACKR1-201ENST00000368121 1240 ntBASIC14.81□□□□□ -0.04
PKP4Q99569 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 AL035633.1-201ENST00000406139 838 ntBASIC14.81□□□□□ -0.04
PKP4Q99569 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.81□□□□□ -0.04
PKP4Q99569 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PKP4Q99569 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.81□□□□□ -0.04
PKP4Q99569 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PKP4Q99569 C8orf49-201ENST00000525043 1968 ntBASIC14.81□□□□□ -0.04
PKP4Q99569 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 KRT8P14-201ENST00000414254 1442 ntBASIC14.81□□□□□ -0.04
PKP4Q99569 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PKP4Q99569 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
PKP4Q99569 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PKP4Q99569 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms