Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AP000845.1-201ENST00000581677 2131 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 GHSR-202ENST00000427970 912 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AC005077.2-201ENST00000449786 690 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AC004898.1-201ENST00000451057 766 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AKR7A2P1-201ENST00000460134 915 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AC044849.1-201ENST00000519737 1188 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 AC023024.2-201ENST00000623561 1993 ntBASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC85AQ96PX6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 AP002414.2-201ENST00000591780 3365 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 SSR4P1-203ENST00000599569 2260 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 CALR4P-201ENST00000431943 946 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 NKAIN1P1-201ENST00000435754 582 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 MESTP3-201ENST00000503460 968 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 AC007663.3-201ENST00000609632 465 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 ZACNP1-201ENST00000612259 710 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 AC244452.3-201ENST00000636814 210 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 LINC00554-201ENST00000564841 3011 ntBASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC85AQ96PX6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC85AQ96PX6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms