Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.13■□□□□ 0.33
FGD4Q96M96 IMP3P2-201ENST00000489760 475 ntBASIC17.13■□□□□ 0.33
FGD4Q96M96 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
FGD4Q96M96 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.13■□□□□ 0.33
FGD4Q96M96 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.13■□□□□ 0.33
FGD4Q96M96 AC023824.1-201ENST00000562945 2975 ntBASIC17.13■□□□□ 0.33
FGD4Q96M96 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.13■□□□□ 0.33
FGD4Q96M96 AL137783.1-201ENST00000623494 1896 ntBASIC17.13■□□□□ 0.33
FGD4Q96M96 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.13■□□□□ 0.33
FGD4Q96M96 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.13■□□□□ 0.33
FGD4Q96M96 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.13■□□□□ 0.33
FGD4Q96M96 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FGD4Q96M96 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FGD4Q96M96 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC092506.1-202ENST00000401022 528 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.12■□□□□ 0.33
FGD4Q96M96 RNMTL1P1-201ENST00000454103 560 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 UPF3AP2-201ENST00000457924 1132 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.12■□□□□ 0.33
FGD4Q96M96 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AC009955.4-201ENST00000597192 544 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 BNIP3P13-201ENST00000599968 566 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 AC138696.2-201ENST00000607376 223 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.12■□□□□ 0.33
FGD4Q96M96 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.12■□□□□ 0.33
FGD4Q96M96 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 AL162426.1-201ENST00000624141 743 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 PRAL-201ENST00000624952 3286 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
FGD4Q96M96 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
FGD4Q96M96 KRT8P19-201ENST00000551916 1455 ntBASIC17.12■□□□□ 0.33
FGD4Q96M96 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.11■□□□□ 0.33
FGD4Q96M96 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 AC026691.1-201ENST00000602502 2017 ntBASIC17.11■□□□□ 0.33
FGD4Q96M96 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
FGD4Q96M96 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.11■□□□□ 0.33
FGD4Q96M96 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 ELK2AP-201ENST00000392510 1007 ntBASIC17.11■□□□□ 0.33
FGD4Q96M96 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FGD4Q96M96 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.11■□□□□ 0.33
FGD4Q96M96 RN7SL774P-201ENST00000577467 290 ntBASIC17.11■□□□□ 0.33
FGD4Q96M96 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
FGD4Q96M96 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms