Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AL035456.1-201ENST00000456064 1369 ntBASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AC092135.3-201ENST00000624151 1846 ntBASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 AC023141.5-201ENST00000458585 616 ntBASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 AL035252.4-201ENST00000624174 288 ntBASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 AC023090.2-201ENST00000625182 2110 ntBASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHAMP1Q96JM3 CETN4P-206ENST00000642099 2168 ntBASIC17.64■□□□□ 0.42
CHAMP1Q96JM3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHAMP1Q96JM3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.64■□□□□ 0.42
CHAMP1Q96JM3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHAMP1Q96JM3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHAMP1Q96JM3 AL354702.1-201ENST00000442006 1960 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 AC109322.1-201ENST00000524499 1264 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TEX28P1-201ENST00000613479 1221 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 AL138828.2-201ENST00000615812 383 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TEX28P2-201ENST00000617764 1221 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 MIR6069-201ENST00000620069 79 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 AC063926.2-201ENST00000623766 1308 ntBASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHAMP1Q96JM3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.63■□□□□ 0.41
CHAMP1Q96JM3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms