Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 COX20P1-201ENST00000366529 357 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 BCAS2P2-201ENST00000425064 674 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC004837.1-201ENST00000446267 564 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 TMCO5B-205ENST00000530020 894 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC009779.1-201ENST00000551138 283 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 ADAM3B-201ENST00000569937 840 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AL513523.2-202ENST00000427283 2040 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 AC090502.4-201ENST00000551714 1386 ntBASIC16.36■□□□□ 0.21
LRCH3Q96II8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH3Q96II8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH3Q96II8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AL596257.1-201ENST00000641463 2694 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AL357563.1-201ENST00000404728 395 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC023141.7-201ENST00000430646 407 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC008723.1-201ENST00000506922 207 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 AP002490.2-201ENST00000524791 560 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC005618.3-201ENST00000624928 458 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH3Q96II8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 AC134407.2-201ENST00000625089 1978 ntBASIC16.35■□□□□ 0.21
LRCH3Q96II8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH3Q96II8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH3Q96II8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRCH3Q96II8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCH3Q96II8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH3Q96II8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms