Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC023310.3-201ENST00000557027 670 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC100756.1-201ENST00000562736 682 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 RRP7BP-205ENST00000566851 833 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC138749.3-201ENST00000567691 622 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC140912.1-201ENST00000577171 1054 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 SPDYE22P-201ENST00000582158 798 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC099568.2-201ENST00000609194 695 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC116165.1-201ENST00000611806 668 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AL662799.1-202ENST00000614205 422 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AF228730.6-201ENST00000641497 218 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 AC084121.3-201ENST00000641716 218 ntBASIC14.67□□□□□ -0.06
VMP1Q96GC9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VMP1Q96GC9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VMP1Q96GC9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 TOMM22P5-201ENST00000416399 439 ntBASIC14.66□□□□□ -0.06
VMP1Q96GC9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 API5-211ENST00000534695 560 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RARRES2P5-201ENST00000564013 466 ntBASIC14.66□□□□□ -0.06
VMP1Q96GC9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.66□□□□□ -0.06
VMP1Q96GC9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VMP1Q96GC9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VMP1Q96GC9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VMP1Q96GC9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
VMP1Q96GC9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms