Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 MIR1202-201ENST00000408529 83 ntBASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 RPS2P32-201ENST00000439199 892 ntBASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 AC023310.1-201ENST00000554836 735 ntBASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 TSPY26P-202ENST00000565928 3884 ntBASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ECHDC3Q96DC8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 FAM8A4P-201ENST00000435433 1213 ntBASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AC244107.1-201ENST00000442033 332 ntBASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 LINC00528-201ENST00000600723 2160 ntBASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AC138696.2-201ENST00000607376 223 ntBASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ECHDC3Q96DC8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 AL354989.2-201ENST00000435838 1540 ntBASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.12■□□□□ 0.01
ECHDC3Q96DC8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms