Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.71□□□□□ -0.21
PTP4A1Q93096 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 AC027369.6-201ENST00000525520 931 ntBASIC13.71□□□□□ -0.21
PTP4A1Q93096 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 AC073592.8-201ENST00000624126 511 ntBASIC13.71□□□□□ -0.21
PTP4A1Q93096 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PTP4A1Q93096 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PTP4A1Q93096 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PTP4A1Q93096 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
PTP4A1Q93096 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.71□□□□□ -0.22
PTP4A1Q93096 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.71□□□□□ -0.22
PTP4A1Q93096 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.71□□□□□ -0.22
PTP4A1Q93096 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTP4A1Q93096 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AC097493.3-201ENST00000509725 367 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AC010336.2-201ENST00000564226 506 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AL158211.3-201ENST00000607385 239 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 AC074044.1-201ENST00000609673 707 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 TEX28P1-201ENST00000613479 1221 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 TEX28P2-201ENST00000617764 1221 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AC136759.1-202ENST00000530858 2194 ntBASIC13.7□□□□□ -0.22
PTP4A1Q93096 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.7□□□□□ -0.22
PTP4A1Q93096 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTP4A1Q93096 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms