Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.06□□□□□ -0.16
CT55Q8WUE5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.06□□□□□ -0.16
CT55Q8WUE5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CT55Q8WUE5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CT55Q8WUE5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RN7SKP230-201ENST00000365642 335 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ACTG1P2-201ENST00000415776 1125 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 ACTG1P11-201ENST00000425411 1125 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RN7SL720P-201ENST00000488178 304 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RN7SL190P-201ENST00000582519 257 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.05□□□□□ -0.16
CT55Q8WUE5 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.05□□□□□ -0.16
CT55Q8WUE5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CT55Q8WUE5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 DOC2GP-204ENST00000639052 2548 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC010141.1-201ENST00000411585 623 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms