Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP43Q8NDM7 AC022532.1-201ENST00000624563 1728 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 MIR557-201ENST00000385239 98 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 AC006122.1-201ENST00000493323 440 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 AC027237.1-201ENST00000560942 655 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 MIR4522-201ENST00000584932 87 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 SALL4P5-201ENST00000419001 1760 ntBASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP43Q8NDM7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 AC105917.1-201ENST00000506637 2539 ntBASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 LINC00528-201ENST00000600723 2160 ntBASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 ORAOV1P1-201ENST00000503108 395 ntBASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 ALG1L13P-202ENST00000519320 584 ntBASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP43Q8NDM7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 LYPLA2P1-203ENST00000447689 696 ntBASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 AL118516.1-201ENST00000564152 670 ntBASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC23.12■■□□□ 1.29
CFAP43Q8NDM7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 AC012441.2-201ENST00000444843 739 ntBASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 AC138466.4-201ENST00000623965 852 ntBASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms