Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.94□□□□□ -0.5
C3orf56Q8N813 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AL354877.1-201ENST00000424412 413 ntBASIC11.94□□□□□ -0.5
C3orf56Q8N813 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC019193.1-201ENST00000506678 823 ntBASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC073352.2-201ENST00000609385 439 ntBASIC11.94□□□□□ -0.5
C3orf56Q8N813 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 AC009084.3-201ENST00000623356 437 ntBASIC11.94□□□□□ -0.5
C3orf56Q8N813 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.94□□□□□ -0.5
C3orf56Q8N813 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
C3orf56Q8N813 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms