Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 MYCLP2-201ENST00000449268 967 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 ELK1P1-201ENST00000485699 580 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AC140912.1-201ENST00000577171 1054 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 CTBP2P3-201ENST00000585629 1255 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AC008494.3-201ENST00000606615 944 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AC007431.3-201ENST00000623221 587 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 AC026748.1-201ENST00000624349 3251 ntBASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
C11orf42Q8N5U0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC022532.1-201ENST00000624563 1728 ntBASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 DRD5P1-201ENST00000456605 1438 ntBASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 DGCR5-201ENST00000399539 862 ntBASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 WASH4P-201ENST00000564273 1246 ntBASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms