Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 MRPL37P1-201ENST00000592451 1337 ntBASIC23.37■■□□□ 1.33
VPS8Q8N3P4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS8Q8N3P4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AL157407.1-201ENST00000435784 904 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AC103988.2-201ENST00000561804 725 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 BNIP3P13-201ENST00000599968 566 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AC007663.3-201ENST00000609632 465 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 PCBP2-OT1-201ENST00000634357 590 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
VPS8Q8N3P4 KRT8P29-201ENST00000420409 1371 ntBASIC23.36■■□□□ 1.33
VPS8Q8N3P4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 AC018529.2-202ENST00000611482 3087 ntBASIC23.35■■□□□ 1.33
VPS8Q8N3P4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 AC044849.1-201ENST00000519737 1188 ntBASIC23.35■■□□□ 1.33
VPS8Q8N3P4 AC126915.1-201ENST00000522847 1038 ntBASIC23.35■■□□□ 1.33
VPS8Q8N3P4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 KHSRPP1-201ENST00000427983 1768 ntBASIC23.35■■□□□ 1.33
VPS8Q8N3P4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 AL136172.1-201ENST00000598590 1394 ntBASIC23.35■■□□□ 1.33
VPS8Q8N3P4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS8Q8N3P4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 AC022494.1-201ENST00000466044 728 ntBASIC23.34■■□□□ 1.33
VPS8Q8N3P4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 GPR182-203ENST00000622922 591 ntBASIC23.34■■□□□ 1.33
VPS8Q8N3P4 TNRC18P2-201ENST00000417666 2714 ntBASIC23.34■■□□□ 1.33
VPS8Q8N3P4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS8Q8N3P4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS8Q8N3P4 VDAC1P1-201ENST00000439229 848 ntBASIC23.33■■□□□ 1.33
VPS8Q8N3P4 AC013355.1-201ENST00000562625 723 ntBASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms