Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 BEND3P1-201ENST00000421591 1944 ntBASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 ACE3P-201ENST00000423435 1973 ntBASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 CR383656.2-201ENST00000548656 2254 ntBASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
DEPDC4Q8N2C3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 MIR346-201ENST00000362234 95 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 KLF2P3-201ENST00000451977 1087 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC125807.1-201ENST00000483097 614 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC026150.2-201ENST00000564693 1156 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AL139385.1-201ENST00000611744 3272 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 MIR6080-201ENST00000617359 66 ntBASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEPDC4Q8N2C3 AC006504.5-208ENST00000588784 2401 ntBASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 AC010327.5-201ENST00000586923 3061 ntBASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 AC041040.2-201ENST00000622926 2899 ntBASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 KRT8P37-201ENST00000451609 1420 ntBASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DEPDC4Q8N2C3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 AC107890.1-201ENST00000422478 521 ntBASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
DEPDC4Q8N2C3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 706.7 ms