Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC124068.2-201ENST00000569473 1109 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 SIGLEC22P-201ENST00000599104 714 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC011471.3-201ENST00000623576 402 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC025183.3-201ENST00000623526 1482 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC092850.2-201ENST00000623821 2697 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC023024.2-201ENST00000623561 1993 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 PYY2-201ENST00000315776 282 ntBASIC20.41■□□□□ 0.86
XRN1Q8IZH2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
XRN1Q8IZH2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 AC108734.2-201ENST00000420887 1069 ntBASIC20.4■□□□□ 0.86
XRN1Q8IZH2 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 AC012158.2-201ENST00000536546 354 ntBASIC20.4■□□□□ 0.86
XRN1Q8IZH2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRN1Q8IZH2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 THY1-209ENST00000580275 578 ntTSL 3 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.39■□□□□ 0.86
XRN1Q8IZH2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 RN7SL357P-201ENST00000581065 298 ntBASIC20.39■□□□□ 0.85
XRN1Q8IZH2 AL451007.2-201ENST00000632004 563 ntBASIC20.39■□□□□ 0.85
XRN1Q8IZH2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRN1Q8IZH2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms