Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 RFPL4AP1-201ENST00000530883 850 ntBASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC005498.2-205ENST00000593218 784 ntBASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC140479.7-201ENST00000636301 2332 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 HLA-K-203ENST00000430151 1046 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC093813.1-201ENST00000605066 256 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AL662799.1-202ENST00000614205 422 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 SBF1P1-201ENST00000444527 5631 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC007326.2-201ENST00000624224 7579 ntBASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKL3Q8IVW4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
CDKL3Q8IVW4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDKL3Q8IVW4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 AC093004.1-201ENST00000508850 424 ntBASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.64■□□□□ 0.09
CDKL3Q8IVW4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms