Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RNA5SP421-201ENST00000516864 134 ntBASIC13.62□□□□□ -0.23
LRRC28Q86X40 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 AC061975.2-201ENST00000581722 295 ntBASIC13.62□□□□□ -0.23
LRRC28Q86X40 AC005498.2-205ENST00000593218 784 ntBASIC13.62□□□□□ -0.23
LRRC28Q86X40 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC097493.3-201ENST00000509725 367 ntBASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC011467.4-201ENST00000594891 528 ntBASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AL691432.1-201ENST00000596308 1422 ntBASIC13.61□□□□□ -0.23
LRRC28Q86X40 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 PTENP1-202ENST00000532280 3996 ntBASIC13.61□□□□□ -0.23
LRRC28Q86X40 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRC28Q86X40 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRC28Q86X40 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRC28Q86X40 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
LRRC28Q86X40 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms