Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC005962.1-201ENST00000584100 773 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 AC051619.9-201ENST00000623237 597 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PCDH8P1-201ENST00000428983 2773 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 FAM90A7P-201ENST00000382628 1395 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 FAM90A23P-201ENST00000400136 1395 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 RN7SKP230-201ENST00000365642 335 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 AL627231.1-201ENST00000394467 1125 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 AC078875.1-201ENST00000431907 724 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 AC024909.3-201ENST00000611513 2257 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 KRT8P21-201ENST00000430398 1491 ntBASIC14.76□□□□□ -0.05
LYSMD4Q5XG99 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD4Q5XG99 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms