Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNFT1Q5M7Z0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 PAUPAR-201ENST00000630360 2965 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC012508.2-201ENST00000567613 1472 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC008741.2-201ENST00000612792 3115 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AL136309.1-201ENST00000403917 691 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC005077.2-201ENST00000449786 690 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 IGHJ2P-201ENST00000454480 60 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC044849.1-201ENST00000519737 1188 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC020914.3-201ENST00000594712 304 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC009093.2-202ENST00000620513 2079 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC136621.1-201ENST00000624017 2304 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC087481.3-201ENST00000602886 1894 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AP000593.2-201ENST00000542775 1433 ntBASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNFT1Q5M7Z0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AC112693.3-201ENST00000624819 1983 ntBASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AC020910.5-201ENST00000623668 1865 ntBASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AL354877.1-201ENST00000424412 413 ntBASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 AL358472.3-201ENST00000608147 415 ntBASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms