Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 RN7SKP230-201ENST00000365642 335 ntBASIC20.83■□□□□ 0.93
CDCA8Q53HL2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 CHMP1AP1-201ENST00000445563 662 ntBASIC20.83■□□□□ 0.93
CDCA8Q53HL2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 RPL13AP20-201ENST00000459725 609 ntBASIC20.83■□□□□ 0.93
CDCA8Q53HL2 FAM86HP-204ENST00000513466 959 ntBASIC20.83■□□□□ 0.93
CDCA8Q53HL2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDCA8Q53HL2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 REXO1L6P-201ENST00000603433 1515 ntBASIC20.83■□□□□ 0.92
CDCA8Q53HL2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDCA8Q53HL2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 MIR1908-201ENST00000410394 80 ntBASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ACTBP11-201ENST00000436287 1126 ntBASIC20.82■□□□□ 0.92
CDCA8Q53HL2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 MIR4741-201ENST00000579822 90 ntBASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 AC244157.2-201ENST00000616239 1006 ntBASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 AC011840.2-201ENST00000563063 1520 ntBASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDCA8Q53HL2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 AL023775.1-201ENST00000454907 1746 ntBASIC20.81■□□□□ 0.92
CDCA8Q53HL2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 ALG3P1-201ENST00000508806 1114 ntBASIC20.81■□□□□ 0.92
CDCA8Q53HL2 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 AC091951.1-201ENST00000512854 2465 ntBASIC20.81■□□□□ 0.92
CDCA8Q53HL2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCA8Q53HL2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.8■□□□□ 0.92
CDCA8Q53HL2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms