Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PUDPP3-201ENST00000445368 636 ntBASIC18.01■□□□□ 0.47
PDS5AQ29RF7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18■□□□□ 0.47
PDS5AQ29RF7 AL008707.1-201ENST00000422498 534 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 AC021723.1-201ENST00000486306 515 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18■□□□□ 0.47
PDS5AQ29RF7 AC106794.1-201ENST00000506935 792 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 MARK2P5-201ENST00000507649 634 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18■□□□□ 0.47
PDS5AQ29RF7 ACTG1P17-201ENST00000558391 1119 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18■□□□□ 0.47
PDS5AQ29RF7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 PCBP2-OT1-201ENST00000634357 590 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 AC004923.1-202ENST00000642106 209 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDS5AQ29RF7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDS5AQ29RF7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 AC007292.2-201ENST00000593524 1812 ntBASIC18■□□□□ 0.47
PDS5AQ29RF7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18■□□□□ 0.47
PDS5AQ29RF7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDS5AQ29RF7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 AC004899.1-201ENST00000424687 1714 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 FNTAP2-201ENST00000430308 634 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 AC012441.2-201ENST00000444843 739 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 AC005740.2-201ENST00000511085 419 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 NDUFV2P1-201ENST00000596415 907 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 Z98259.2-201ENST00000641583 609 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms