Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXC1Q12948 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
FOXC1Q12948 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 AC084364.1-201ENST00000551967 1556 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
FOXC1Q12948 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FOXC1Q12948 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 TSPY25P-201ENST00000429463 745 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 FTH1P22-201ENST00000456305 520 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXC1Q12948 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXC1Q12948 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXC1Q12948 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXC1Q12948 AC055811.3-201ENST00000584952 686 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 AC138696.2-201ENST00000607376 223 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 AL139339.2-201ENST00000608063 657 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 AP000322.3-201ENST00000608665 388 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 MIR6816-201ENST00000620368 66 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 LINC01165-201ENST00000445190 1623 ntBASIC14.18□□□□□ -0.14
FOXC1Q12948 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXC1Q12948 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXC1Q12948 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FOXC1Q12948 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXC1Q12948 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXC1Q12948 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 SERBP1P2-201ENST00000436888 1164 ntBASIC14.17□□□□□ -0.14
FOXC1Q12948 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXC1Q12948 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
FOXC1Q12948 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXC1Q12948 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
FOXC1Q12948 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXC1Q12948 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FOXC1Q12948 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXC1Q12948 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXC1Q12948 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXC1Q12948 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXC1Q12948 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXC1Q12948 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXC1Q12948 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXC1Q12948 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms