Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CD47Q08722 RPSAP43-201ENST00000402237 625 ntBASIC14.21□□□□□ -0.13
CD47Q08722 AC211486.1-202ENST00000416371 468 ntBASIC14.21□□□□□ -0.13
CD47Q08722 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 RBPMS2P1-201ENST00000437762 623 ntBASIC14.21□□□□□ -0.13
CD47Q08722 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.21□□□□□ -0.13
CD47Q08722 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.21□□□□□ -0.13
CD47Q08722 AC211476.1-201ENST00000503899 468 ntBASIC14.21□□□□□ -0.13
CD47Q08722 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.21□□□□□ -0.13
CD47Q08722 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.21□□□□□ -0.13
CD47Q08722 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
CD47Q08722 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.21□□□□□ -0.13
CD47Q08722 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.21□□□□□ -0.13
CD47Q08722 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.21□□□□□ -0.13
CD47Q08722 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.21□□□□□ -0.13
CD47Q08722 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CD47Q08722 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CD47Q08722 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD47Q08722 KRT8P37-201ENST00000451609 1420 ntBASIC14.21□□□□□ -0.13
CD47Q08722 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CD47Q08722 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.21□□□□□ -0.13
CD47Q08722 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CD47Q08722 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD47Q08722 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CD47Q08722 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD47Q08722 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD47Q08722 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.2□□□□□ -0.14
CD47Q08722 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 FAM58DP-201ENST00000428076 619 ntBASIC14.2□□□□□ -0.14
CD47Q08722 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.2□□□□□ -0.14
CD47Q08722 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.2□□□□□ -0.14
CD47Q08722 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.2□□□□□ -0.14
CD47Q08722 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.2□□□□□ -0.14
CD47Q08722 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD47Q08722 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.2□□□□□ -0.14
CD47Q08722 AC003101.2-201ENST00000612557 442 ntBASIC14.2□□□□□ -0.14
CD47Q08722 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD47Q08722 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CD47Q08722 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD47Q08722 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD47Q08722 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
CD47Q08722 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD47Q08722 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.19□□□□□ -0.14
CD47Q08722 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.19□□□□□ -0.14
CD47Q08722 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 GHSR-202ENST00000427970 912 ntBASIC14.19□□□□□ -0.14
CD47Q08722 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.19□□□□□ -0.14
CD47Q08722 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 AC018529.1-201ENST00000613063 361 ntBASIC14.19□□□□□ -0.14
CD47Q08722 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.19□□□□□ -0.14
CD47Q08722 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms