Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC004945.1-201ENST00000416738 983 ntBASIC13.94□□□□□ -0.18
LTBQ06643 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
LTBQ06643 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.94□□□□□ -0.18
LTBQ06643 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.94□□□□□ -0.18
LTBQ06643 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.94□□□□□ -0.18
LTBQ06643 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.94□□□□□ -0.18
LTBQ06643 AL645728.2-202ENST00000641679 227 ntBASIC13.94□□□□□ -0.18
LTBQ06643 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 AC023908.3-201ENST00000564211 3047 ntBASIC13.94□□□□□ -0.18
LTBQ06643 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.94□□□□□ -0.18
LTBQ06643 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LTBQ06643 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LTBQ06643 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LTBQ06643 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LTBQ06643 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LTBQ06643 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ACE3P-201ENST00000423435 1973 ntBASIC13.93□□□□□ -0.18
LTBQ06643 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.93□□□□□ -0.18
LTBQ06643 AC022210.1-201ENST00000449856 793 ntBASIC13.93□□□□□ -0.18
LTBQ06643 AC011495.1-201ENST00000498085 584 ntBASIC13.93□□□□□ -0.18
LTBQ06643 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.93□□□□□ -0.18
LTBQ06643 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.93□□□□□ -0.18
LTBQ06643 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
LTBQ06643 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 AC132938.2-201ENST00000579188 680 ntBASIC13.93□□□□□ -0.18
LTBQ06643 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 AL591163.1-201ENST00000641757 987 ntBASIC13.93□□□□□ -0.18
LTBQ06643 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.93□□□□□ -0.18
LTBQ06643 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
LTBQ06643 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.93□□□□□ -0.18
LTBQ06643 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LTBQ06643 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.92□□□□□ -0.18
LTBQ06643 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LTBQ06643 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms