Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3AP84243 MSTO2P-201ENST00000314835 1709 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
H3F3AP84243 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SBF1P1-201ENST00000444527 5631 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 LINC00528-201ENST00000600723 2160 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
H3F3AP84243 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
H3F3AP84243 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H3F3AP84243 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
H3F3AP84243 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
H3F3AP84243 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.61□□□□□ -0.23
H3F3AP84243 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.61□□□□□ -0.23
H3F3AP84243 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.61□□□□□ -0.23
H3F3AP84243 GIMAP3P-201ENST00000495150 836 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.61□□□□□ -0.23
H3F3AP84243 PTP4A1P2-201ENST00000546033 454 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 AC132938.2-201ENST00000579188 680 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 AC015936.2-201ENST00000593177 259 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.61□□□□□ -0.23
H3F3AP84243 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.61□□□□□ -0.23
H3F3AP84243 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.61□□□□□ -0.23
H3F3AP84243 AL591163.1-201ENST00000641757 987 ntBASIC13.61□□□□□ -0.23
H3F3AP84243 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.61□□□□□ -0.23
H3F3AP84243 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.61□□□□□ -0.23
H3F3AP84243 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.61□□□□□ -0.23
H3F3AP84243 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H3F3AP84243 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.6□□□□□ -0.23
H3F3AP84243 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H3F3AP84243 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
H3F3AP84243 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.6□□□□□ -0.23
H3F3AP84243 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.6□□□□□ -0.23
H3F3AP84243 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.6□□□□□ -0.23
H3F3AP84243 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 KRT18P25-201ENST00000508931 1278 ntBASIC13.6□□□□□ -0.23
H3F3AP84243 AC022616.1-201ENST00000518688 554 ntBASIC13.6□□□□□ -0.23
H3F3AP84243 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.6□□□□□ -0.23
H3F3AP84243 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 TDH-203ENST00000531764 1110 ntBASIC13.6□□□□□ -0.23
H3F3AP84243 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H3F3AP84243 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 AC012645.4-201ENST00000610691 1061 ntBASIC13.6□□□□□ -0.23
H3F3AP84243 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.6□□□□□ -0.23
H3F3AP84243 IGHV3-72-202ENST00000621503 303 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms