Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
AP1S1P61966 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.27■□□□□ 0.04
AP1S1P61966 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.27■□□□□ 0.04
AP1S1P61966 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
AP1S1P61966 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AP1S1P61966 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.27■□□□□ 0.04
AP1S1P61966 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S1P61966 CD8B2-202ENST00000417670 633 ntBASIC15.27■□□□□ 0.04
AP1S1P61966 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.27■□□□□ 0.04
AP1S1P61966 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.27■□□□□ 0.04
AP1S1P61966 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.27■□□□□ 0.04
AP1S1P61966 KLF2P4-201ENST00000451959 1225 ntBASIC15.27■□□□□ 0.04
AP1S1P61966 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.27■□□□□ 0.04
AP1S1P61966 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.27■□□□□ 0.04
AP1S1P61966 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.27■□□□□ 0.04
AP1S1P61966 RHOXF1P1-202ENST00000635473 501 ntBASIC15.27■□□□□ 0.04
AP1S1P61966 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
AP1S1P61966 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
AP1S1P61966 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.27■□□□□ 0.03
AP1S1P61966 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.27■□□□□ 0.03
AP1S1P61966 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S1P61966 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 PCDHA3-202ENST00000532566 4594 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 TSPY26P-202ENST00000565928 3884 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 GK-202ENST00000378941 458 ntTSL 3 BASIC15.26■□□□□ 0.03
AP1S1P61966 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 MIR1909-201ENST00000411312 80 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 POM121L8P-201ENST00000417732 1281 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.26■□□□□ 0.03
AP1S1P61966 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 FAM197Y7-201ENST00000432892 766 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 POM121L9P-203ENST00000441984 1285 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 CTBP2P5-201ENST00000454986 1264 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 IGHV3-71-201ENST00000523324 359 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
AP1S1P61966 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.26■□□□□ 0.03
AP1S1P61966 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.26■□□□□ 0.03
AP1S1P61966 AC017083.2-201ENST00000608069 979 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 AC138951.2-201ENST00000623455 1161 ntBASIC15.26■□□□□ 0.03
AP1S1P61966 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms